vamp plugin

Calcium Signal Analyser

Submitted by mathieub on Wed, 09/08/2010 - 14:19
Mathieu Barthet, Katy Noland

The Calcium Signal Analyser is a plugin for feature extraction from calcium data measured in zebrafish (tropical freshwater fish) living embryos.

It is based on signal processing techniques developed to analyze music signals [Bello, 2005]. It uses the Vamp plugin format suitable for use in programs such as Sonic Visualiser and Sonic Annotator.